The experimental results and comparisons with other works are presented inResults and discussion section, while they are discussed in Discussion section Finally, the conclusion is described in Conclusion section. Johnson, D.S., Johnson, D. L.L., Elavarasan, P. & Karunanithi, A. Hence, it was discovered that the VGG-16 based DTL model classified COVID-19 better than the VGG-19 based DTL model. The evaluation showed that the RDFS improved SVM robustness against reconstruction kernel and slice thickness. \(r_1\) and \(r_2\) are the random index of the prey. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. Sahlol, A. T., Kollmannsberger, P. & Ewees, A. A joint segmentation and classification framework for COVID19 BDCC | Free Full-Text | COVID-19 Classification through Deep Learning Sci. Li et al.34 proposed a self-adaptive bat algorithm (BA) to address two problems in lung X-ray images, rebalancing, and feature selection. A Review of Deep Learning Imaging Diagnostic Methods for COVID-19 Google Scholar. Extensive comparisons had been implemented to compare the FO-MPA with several feature selection algorithms, including SMA, HHO, HGSO, WOA, SCA, bGWO, SGA, BPSO, besides the classic MPA. 101, 646667 (2019). The algorithm combines the assessment of image quality, digital image processing and deep learning for segmentation of the lung tissues and their classification. Kharrat, A. Harris hawks optimization: algorithm and applications. Havaei, M. et al. Classification and visual explanation for COVID-19 pneumonia from CT To survey the hypothesis accuracy of the models. If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. 6 (left), for dataset 1, it can be seen that our proposed FO-MPA approach outperforms other CNN models like VGGNet, Xception, Inception, Mobilenet, Nasnet, and Resnet. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. On the second dataset, dataset 2 (Fig. Initialize solutions for the prey and predator. Also, because COVID-19 is a virus, distinguish COVID-19 from common viral . In general, feature selection (FS) methods are widely employed in various applications of medical imaging applications. & Cao, J. Whereas the worst one was SMA algorithm. COVID-19-X-Ray-Classification Utilizing Deep Learning to detect COVID-19 and Viral Pneumonia from x-ray images Research Publication: https://dl.acm.org/doi/10.1145/3431804 Datasets used: COVID-19 Radiography Database COVID-19 10000 Images Related Research Papers: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7187882/ After feature extraction, we applied FO-MPA to select the most significant features. (4). Classification of COVID19 using Chest X-ray Images in Keras - Coursera These datasets contain hundreds of frontal view X-rays and considered the largest public resource for COVID-19 image data. First: prey motion based on FC the motion of the prey of Eq. JMIR Formative Research - Classifying COVID-19 Patients From Chest X-ray Images Using Hybrid Machine Learning Techniques: Development and Evaluation Published on 28.2.2023 in Vol 7 (2023) Preprints (earlier versions) of this paper are available at https://preprints.jmir.org/preprint/42324, first published August 31, 2022 . 95, 5167 (2016). In this subsection, the results of FO-MPA are compared against most popular and recent feature selection algorithms, such as Whale Optimization Algorithm (WOA)49, Henry Gas Solubility optimization (HGSO)50, Sine cosine Algorithm (SCA), Slime Mould Algorithm (SMA)51, Particle Swarm Optimization (PSO), Grey Wolf Optimization (GWO)52, Harris Hawks Optimization (HHO)53, Genetic Algorithm (GA), and basic MPA. Pangolin - Wikipedia Moreover, the Weibull distribution employed to modify the exploration function. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. Semi-supervised Learning for COVID-19 Image Classification via ResNet 42, 6088 (2017). Appl. Expert Syst. COVID-19 image classification using deep learning: Advances - PubMed (8) at \(T = 1\), the expression of Eq. The proposed approach selected successfully 130 and 86 out of 51 K features extracted by inception from dataset 1 and dataset 2, while improving classification accuracy at the same time. Acharya, U. R. et al. & Wang, W. Medical image segmentation using fruit fly optimization and density peaks clustering. The variants of concern are Alpha, Beta, Gamma, and than the COVID-19 images. 4a, the SMA was considered as the fastest algorithm among all algorithms followed by BPSO, FO-MPA, and HHO, respectively, while MPA was the slowest algorithm. (8) can be remodeled as below: where \(D^1[x(t)]\) represents the difference between the two followed events. Number of extracted feature and classification accuracy by FO-MPA compared to other CNNs on dataset 1 (left) and on dataset 2 (right). Performance analysis of neural networks for classification of medical images with wavelets as a feature extractor. Computed tomography (CT) and magnetic resonance imaging (MRI) represent valuable input to AI algorithms, scanning human body sections for the sake of diagnosis. They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. Classification of Human Monkeypox Disease Using Deep Learning Models The Shearlet transform FS method showed better performances compared to several FS methods. IEEE Signal Process. Stage 2: The prey/predator in this stage begin exploiting the best location that detects for their foods. In 2019 26th National and 4th International Iranian Conference on Biomedical Engineering (ICBME), 194198 (IEEE, 2019). J. Inception architecture is described in Fig. They applied the SVM classifier with and without RDFS. In Table4, for Dataset 1, the proposed FO-MPA approach achieved the highest accuracy in the best and mean measures, as it reached 98.7%, and 97.2% of correctly classified samples, respectively. 111, 300323. & Cmert, Z. The combination of Conv. & Zhu, Y. Kernel feature selection to fuse multi-spectral mri images for brain tumor segmentation. Covid-19 dataset. Classification Covid-19 X-Ray Images | by Falah Gatea | Medium 500 Apologies, but something went wrong on our end. COVID-19 Image Classification Using VGG-16 & CNN based on CT - IJRASET 6, right), our approach still provides an overall accuracy of 99.68%, putting it first with a slight advantage over MobileNet (99.67 %). So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. An image segmentation approach based on fuzzy c-means and dynamic particle swarm optimization algorithm. what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. The parameters of each algorithm are set according to the default values. In COVID19 triage, DB-YNet is a promising tool to assist physicians in the early identification of COVID19 infected patients for quick clinical interventions. 9, 674 (2020). Stage 3: This stage executed on the last third of the iteration numbers (\(t>\frac{2}{3}t_{max}\)) where based on the following formula: Eddy formation and Fish Aggregating Devices effect: Faramarzi et al.37 considered the external impacts from the environment, such as the eddy formation or Fish Aggregating Devices (FADs) effects to avoid the local optimum solutions. & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. SARS-CoV-2 Variant Classifications and Definitions Syst. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. COVID-19 Chest X -Ray Image Classification with Neural Network Currently we are suffering from COVID-19, and the situation is very serious. The HGSO also was ranked last. Therefore, reducing the size of the feature from about 51 K as extracted by deep neural networks (Inception) to be 128.5 and 86 in dataset 1 and dataset 2, respectively, after applying FO-MPA algorithm while increasing the general performance can be considered as a good achievement as a machine learning goal. CAS Dual feature selection and rebalancing strategy using metaheuristic optimization algorithms in x-ray image datasets. & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. It classifies the chest X-ray images into three categories that includes Covid-19, Pneumonia and normal. Diagnosis of parkinsons disease with a hybrid feature selection algorithm based on a discrete artificial bee colony. Classification of Covid-19 X-Ray Images Using Fuzzy Gabor Filter and arXiv preprint arXiv:2004.07054 (2020). (22) can be written as follows: By taking into account the early mentioned relation in Eq. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. Li, J. et al. Also, some image transformations were applied, such as rotation, horizontal flip, and scaling. \delta U_{i}(t)+ \frac{1}{2! New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. They were also collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location. the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in COVID 19 X-ray image classification. By submitting a comment you agree to abide by our Terms and Community Guidelines. Eurosurveillance 18, 20503 (2013). Bibliographic details on CECT: Controllable Ensemble CNN and Transformer for COVID-19 image classification by capturing both local and global image features. Refresh the page, check Medium 's site status, or find something interesting. The predator uses the Weibull distribution to improve the exploration capability. Tensorflow: Large-scale machine learning on heterogeneous systems, 2015. Acharya et al.11 applied different FS methods to classify Alzheimers disease using MRI images. Computer Vision - ECCV 2020 16th European Conference, Glasgow, UK Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. Moreover, from Table4, it can be seen that the proposed FO-MPA provides better results in terms of F-Score, as it has the highest value in datatset1 and datatset2 which are 0.9821 and 0.99079, respectively. The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. The test accuracy obtained for the model was 98%. Also, WOA algorithm showed good results in all measures, unlike dataset 1, which can conclude that no algorithm can solve all kinds of problems. Toaar, M., Ergen, B. (5). They are distributed among people, bats, mice, birds, livestock, and other animals1,2. They compared the BA to PSO, and the comparison outcomes showed that BA had better performance. It is calculated between each feature for all classes, as in Eq. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. They applied a fuzzy decision tree classifier, and they found that fuzzy PSO improved the classification accuracy. 97, 849872 (2019). Radiology 295, 2223 (2020). In transfer learning, a CNN which was previously trained on a large & diverse image dataset can be applied to perform a specific classification task by23. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. Eng. where \(R_L\) has random numbers that follow Lvy distribution. Generally, the proposed FO-MPA approach showed satisfying performance in both the feature selection ratio and the classification rate. Authors Phys. Image Anal. Correspondence to In Future of Information and Communication Conference, 604620 (Springer, 2020). In this paper, after applying Chi-square, the feature vector is minimized for both datasets from 51200 to 2000. Mobilenets: Efficient convolutional neural networks for mobile vision applications. Ozturk et al. The Marine Predators Algorithm (MPA)is a recently developed meta-heuristic algorithm that emulates the relation among the prey and predator in nature37. Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. 43, 635 (2020). Figure6 shows a comparison between our FO-MPA approach and other CNN architectures. IEEE Trans. Sci Rep 10, 15364 (2020). J. You are using a browser version with limited support for CSS. The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. The data was collected mainly from retrospective cohorts of pediatric patients from Guangzhou Women and Childrens medical center. In Eq. For example, Da Silva et al.30 used the genetic algorithm (GA) to develop feature selection methods for ranking the quality of medical images. Thank you for visiting nature.com. The name "pangolin" comes from the Malay word pengguling meaning "one who rolls up" from guling or giling "to roll"; it was used for the Sunda pangolin (Manis javanica). J. Med. where \(fi_{i}\) represents the importance of feature I, while \(ni_{j}\) refers to the importance of node j. Biol. For this motivation, we utilize the FC concept with the MPA algorithm to boost the second step of the standard version of the algorithm. The authors declare no competing interests. The prey follows Weibull distribution during discovering the search space to detect potential locations of its food. Two real datasets about COVID-19 patients are studied in this paper. Imaging Syst. The predator tries to catch the prey while the prey exploits the locations of its food. where \(REfi_{i}\) represents the importance of feature i that were calculated from all trees, where \(normfi_{ij}\) is the normalized feature importance for feature i in tree j, also T is the total number of trees. The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. https://www.sirm.org/category/senza-categoria/covid-19/ (2020). While the second dataset, dataset 2 was collected by a team of researchers from Qatar University in Qatar and the University of Dhaka in Bangladesh along with collaborators from Pakistan and Malaysia medical doctors44. It achieves a Dice score of 0.9923 for segmentation, and classification accuracies of 0. Identifying Facemask-Wearing Condition Using Image Super-Resolution is applied before larger sized kernels are applied to reduce the dimension of the channels, which accordingly, reduces the computation cost. 69, 4661 (2014). arXiv preprint arXiv:1704.04861 (2017). We build the first Classification model using VGG16 Transfer leaning framework and second model using Deep Learning Technique Convolutional Neural Network CNN to classify and diagnose the disease and we able to achieve the best accuracy in both the model. A combination of fractional-order and marine predators algorithm (FO-MPA) is considered an integration among a robust tool in mathematics named fractional-order calculus (FO). Dr. Usama Ijaz Bajwa na LinkedIn: #efficientnet #braintumor #mri Our method is able to classify pneumonia from COVID-19 and visualize an abnormal area at the same time. youngsoul/pyimagesearch-covid19-image-classification - GitHub Moreover, other COVID-19 positive images were added by the Italian Society of Medical and Interventional Radiology (SIRM) COVID-19 Database45. Bisong, E. Building Machine Learning and Deep Learning Models on Google Cloud Platform (Springer, Berlin, 2019). Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). Zhang, N., Ruan, S., Lebonvallet, S., Liao, Q. Methods Med. Future Gener. A deep feature learning model for pneumonia detection applying a combination of mRMR feature selection and machine learning models. In this subsection, a comparison with relevant works is discussed. MPA simulates the main aim for most creatures that is searching for their foods, where a predator contiguously searches for food as well as the prey. It also shows that FO-MPA can select the smallest subset of features, which reflects positively on performance. Image Classification With ResNet50 Convolution Neural Network (CNN) on Covid-19 Radiography | by Emmanuella Anggi | The Startup | Medium 500 Apologies, but something went wrong on our end.. Shi, H., Li, H., Zhang, D., Cheng, C. & Cao, X. Remainder sections are organized as follows: Material and methods sectionpresents the methodology and the techniques used in this work including model structure and description. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema.